W4799 - Readings in the Molecular Biology of Cancer - Spring 2004

 

Instructor:   Dr. Lili Yamasaki                                 Lectures:  Tues/Thurs 2:40 – 3:55 pm

                   1102 Fairchild Building                       

                   Department of Biological Sciences        Office Hours:    Wed   3:00 – 4:00 pm

                   854-4384  office

                   ly63@columbia.edu                            

 

Textbooks:   Oncogenes                                                    Geoffrey M. Cooper, 2nd Ed., 1995

                   One Renegade Cell - How Cancer Begins         Robert A. Weinberg, 1999

 

Readings:     Reviews and Primary Papers - To Be Assigned

                                                                                                                            

Schedule of Topics and Textbook Reading

 

January 20 (T)      Overview of Cancer - Mutations and Epidemiology                                                                       Weinberg, Chapters 1, 2                     

 

January 22 (Th)     The Cell Cycle and Model Systems                                                                                              Cooper, Chapter 1

                             Papers

                            

January 27 (T)      DNA Tumor Viruses                                                                                                                   Cooper, Chapter 2

                             Papers         

 

January 29 (Th)     RNA Tumor Viruses                                                                                                                   Cooper, Chapters 3, 4

                             Weinberg, Chapter 3

                             Papers

 

February 3 (T)      Proto-Oncogenes and Oncogene Activation                                                                                   Cooper, Chapters 5, 6

                             Weinberg, Chapter 4

                             Papers

 

February 5 (Th)     Chromosomal Translocations and Amplifications                                                                           Cooper, Chapters 7, 8

                             Papers

 

February 10 (T)    Growth Factors, Tyrosine Kinases (receptor, non-receptor)                                                Cooper, Chapters 12, 13

                             Papers

 

February 12 (Th)  Ras Superfamily and SH2/SH3 Adaptor Proteins                                                                        Cooper, Chapter 14

                             Papers         

 

February 17 (T)     MAP Kinase Pathways and Signal Transduction                                                                             Cooper, Chapters 15, 17

                             Papers

 

February 19 (Th) EXAM I

 

February 24 (T)    Multistep Tumor Development                                                                                                    Cooper, Chapter 11                    

                             Weinberg, Chapters 5, 6

                             Papers                                                                  

         

February 26 (Th)  Retinoblastoma Tumor Suppressor (pRB)                                    

                             Cooper, Chapter 9

                             Weinberg, Chapter 7

                             Papers                                                                                     

 

March 2 (T)           p53                                                                                         

                             Cooper, Chapter 10

                             Papers

 

March 4 (Th)                  Cyclins, CDKs, CKIs, and the INK4A/ARF Locus                        

                             Weinberg, Chapter 14

                             Papers

 

March 9 (T)           Ubiquitin Pathway and Cell Cycle Control

                             Papers

 

March 11 (Th)        Apoptosis and its Effectors                                                      

                             Weinberg, Chapter 13

                             Papers

 

                                                                  

March 16 - 18        SPRING BREAK (No Classes)

                             Weinberg, Chapters 10, 11

 

March 23 (T)         Senescence, Immortalization and Telomerase                              

                             Weinberg, Chapter 12

                             Papers         

 

March 25 (Th)       Student Presentations

 

March 30 (T)            EXAM II

 

                            

April 1 (Th)           NF1, NF2 Tumor Suppressors

                             Papers         

 

April 6 (T)                      WT1 and VHL Tumor Suppressors       

                             Papers                                     

 

April 8 (Th)           APC and b-Catenin Pathway                                                       

                             Weinberg, Chapter 8

                             Papers

 

April 13 (T)           MSH2, MLH1, PMS1-2 and Mismatch Repair                              

                             Weinberg, Chapter 9

                             Papers         

 

April 15 (Th)                   DNA Repair (Double-Strand Break Repair and NER)

                             Papers

 

April 20 (T)          ATM/ATR and BRCA1/BRCA2

                             Papers

 

April 22 (Th)         Angiogenesis and A Look Ahead                                                 

                             Weinberg, Chapters 15, 16

                             Papers

                                                                                     

April 27 (T)          Student Presentations (no lecture) 

 

April 29 (Th)         Student Presentations (no lecture) 

Last Day of Class

 

T.B.A.             FINAL EXAM 

 

 

 

GRADING

30-MIN PRESENTATION        10%

EXAM I                                   30%

EXAM II                                  30%

EXAM III (FINAL)                  30%