Methods
Building a Two-Photon Microscope:
- "A Custom-Made Two-Photon Microscope and Deconvolution System"
- "A Custom Two-Photon and Second-Harmonic Microscope"
- "External PMT Amplifier Info"
- "A Practical Guide: How to Build a Two-Photon Microscope Using a Confocal Scan Head"
- "Two-photon imaging with diffractive optical elements"
Imaging Action Potentials in Neuronal Populations:
- "Detecting Action Potentials in Neuronal Populations with Calcium Imaging"
- "A Practical Guide: Imaging Action Potentials with Calcium Indicators"
- "Spike Detection Using Monte Carlo Methods"
- "Fast non-negative deconvolution for spike train inference from population calcium imaging"
Cluster Analysis
- "Cortical area and species differences in dendritic spine morphology"
- "Quantitative Morphologic Classification of Layer 5 Neurons from Mouse Primary Visual Cortex"
- "Origin and Classification of Neocortical Interneurons"
- "Dendritic Size of Pyramidal Neurons Differs among Mouse Cortical Regions"
- "Correlation Between Axonal Morphologies and Synaptic Input Kinetics of Interneurons "
- "Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex"
- "Quantitative classification of somatostatin-positive neocortical interneurons identifies three interneuron subtypes"
- "Comparison Between Supervised and Unsupervised Classifications of Neuronal Cell Types: A Case Study"
Software (Unsupported):
Circuit Cracking Software (Unsupported):
Imaging Spines:
Optical Probing of Circuits:
- "Direct Multiphoton Stimulation of Neurons and Spines"
- "Optical Probing of Neuronal Circuits with Calcium Indicators"
- "Reverse Optical Probing (ROPING) of Neocortical Circuits"
- "Two-Photon Photostimulation and Imaging of Neural Circuits"
Caged Compounds: (Press Release)
- "RuBi-4 AP: Two-Photon Uncaging of Neurochemicals Using Inorganic Metal Complexes" Purchase: Tocris | Ascent
- "Photorelease of GABA With Visible Light Using an Inorganic Caging Group"(Press Release)Purchase:Tocris | Ascent
- "RuBi-Glutamate: Two-Photon and Visible-Light Photoactivation of Neurons and Dendritic Spines" (Press Release) - Purchase: Tocris | Ascent
- RuBi-Nicotine - Purchase: Ascent
- RuBi-Instructions
SLM Microscopy:
- "SLM Microscopy: Scanless Two-Photon Imaging and Photostimulation Using Spatial Light Modulators" Press Release | News and Views
- "Portable Scanless Microscope: Two- and One-photon Imaging and Photostimulation with Spatial Light Modulators"
- "A portable laser photostimulation and imaging microscope"
- "Photons, neurons, and wellbeing"
- "Scanless linear and nonlinear laser microscopy"
SHG Imaging of Voltage:
- "Second harmonic imaging of membrane potential of neurons with retinal"
- "Imaging membrane potential in dendritic spines"
- "Second Harmonic Generation in Neurons: Electro-Optic Mechanism of Membrane Potential Sensitivity"
- "Second-Harmonic Generation Imaging of Membrane Potential with Photon Counting"
- "Imaging Voltage in Neurons"