SNPs can have variable effects
SNPs can have no effect.  Their change can be
neutral to the protein, e.g. a silent mutation.
SNPs can have a subtle effect, e.g lys to arg
(both are polar basic).  This is what we suspect is
happening in complex genetic diseases
SNPs can have measurable effects (a
pronounced reduction in activity).
SNPs can change protein function.  A new
substrate might be recognized.
SNPs can complete eliminate the proteins ability
to function.