• J.M. Warner, E. Karatekin, and B. O'Shaughnessy, "Model of SNARE-Mediated Membrane Adhesion Kinetics", PLoS ONE, 4, e6375 (2009)
• M.R. Stachowiak and B. O'Shaughnessy, "Recoil After Severing Reveals Stress Fiber Contraction Mechanisms", Biophysical Journal, 97, 462-471 (2009)
• M.R. Stachowiak and B. O'Shaughnessy, "Kinetics of Stress Fibers", New Journal of Physics, 10, 025002 (2008)
• D. Vavylonis, J.-Q. Wu, S. Hao, B. O'Shaughnessy, and T.D. Pollard, "Assembly Mechanism of the Contractile Ring for Cytokinesis by Fission Yeast", Science 319, 97-100 (2008); published online 13 December 2007 (10.1126/science.1151086)
• D. Vavylonis, D.R. Kovar, B. O'Shaughnessy, and T.D. Pollard, "Model of Formin-Associated Actin Filament Elongation", Molecular Cell, 39, 455-466 (2006)
• Jaeup U. Kim and B. O'Shaughnessy, "Nanoinclusions in Polymer Brushes", Macromolecules 39, 413-425 (2006)
• D. Vavylonis, Q. Yang, and B. O'Shaughnessy, "Actin Polymerization Kinetics, Cap Structure and Fluctuations", Proc. Natl. Acad. Sci. USA, 102, 8543-8548 (2005)
• B. O'Shaughnessy and Q. Yang, "Strongly Charged Polymer Brushes" (http://arxiv.org/abs/cond-mat/0408036)
• B. O'Shaughnessy and D. Vavylonis, "Non-Equilibrium in Adsorbed Polymer Layers", J. Phys.:Condens. Matter 17, R63-R99 (2005)
• B. O'Shaughnessy and Q. Yang, "Manning-Oosawa Counterion Condensation", Phys. Rev. Lett. 94, 048302 (2005)
• Jaeup U. Kim and B. O'Shaughnessy, "Laser Pulse Control of High Conversion Free Radical Polymerization", Macromolecules 37, 1630-1640 (2004)
• B. O'Shaughnessy and D. Vavylonis, "Dynamics of Living Polymers", Eur. Phys. J. E 12, 481-496 (2003)
• B. O'Shaughnessy and D. Vavylonis, "The Slowly Formed Guiselin Brush", Europhys. Lett. 63, 895-901 (2003)
• B. O'Shaughnessy and D. Vavylonis, "Pulsed Laser Polymerization at Low Conversions: Broadening and Chain Transfer Effects", Macromol. Theory Simul. 12, 401-412 (2003)
• B. O'Shaughnessy and D. Vavylonis, "Irreversible Adsorption from Dilute Polymer Solutions", Eur. Phys. J. E 11, 213-230 (2003)
• A. Maliakal, H. Greenaway, B. O'Shaughnessy, and N. J. Turro, "Chain Length Dependent Polymer End-End Reaction Rate Constants in the Reaction of Polystyryllithium with a Styrene Terminated Fluorescence Labeled Polystyrene", Macromolecules 36, 6075-6080 (2003)
• Zhiqiang Liu, Matthias Weber, Nicholas J. Turro, and Ben O'Shaughnessy, "Synthesis and Photochemistry of Monodisperse Oligomeric/Polymeric Photoinitiators". In Photoinitiated Polymerization, chapter 9, Oxford University Press, Oxford, 2003. ACS Symposium Series, No. 847, edited by K. D. Belfield and J. V. Crivelo
• B. O'Shaughnessy and D. Vavylonis, "Irreversibility and Polymer Adsorption", Phys. Rev. Lett. 90, 056103 (2003)
• B. O'Shaughnessy and D. Vavylonis, "The Ultrasensitivity of Living Polymers", Phys. Rev. Lett. 90, 118301 (2003)
• Jaeup U. Kim and Ben O'Shaughnessy, "Morphology Selection of Nanoparticle Dispersions by Polymer Media", Phys. Rev. Lett. 89, 238301 (2002)