Probe Name Symbol IPE RPE RPE/IPE p-value
1051_g_at melan-A MLANA 5346.83 834.99 6.40 0.00006
1121_g_at glutathione S-transferase M3 (brain) GSTM3 1542.15 266.03 5.80 0.00991
1147_at --- --- 811.23 171.32 4.74 0.00001
1363_at fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome) FGFR2 899.59 246.57 3.65 0.00047
1495_at latent transforming growth factor beta binding protein 1 LTBP1 305.81 73.31 4.17 0.00017
1527_s_at hypothetical gene CG018 CG018 347.76 80.88 4.30 0.00105
1767_s_at transforming growth factor, beta 3 TGFB3 766.83 207.84 3.69 0.00000
1787_at cyclin-dependent kinase inhibitor 1C (p57, Kip2) CDKN1C 1905.03 472.72 4.03 0.00059
2049_s_at jun B proto-oncogene JUNB 1177.50 243.49 4.84 0.00063
2056_at fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome) FGFR1 1359.17 314.53 4.32 0.00000
2057_g_at fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome) FGFR1 2321.64 464.85 4.99 0.00000
31508_at thioredoxin interacting protein TXNIP 2265.03 540.01 4.19 0.00001
31672_g_at RNA binding motif, single stranded interacting protein 1 RBMS1 455.36 132.98 3.42 0.00115
31889_at melan-A MLANA 5973.67 1065.91 5.60 0.00002
32160_at seven in absentia homolog 1 (Drosophila) SIAH1 932.17 245.98 3.79 0.00000
32307_s_at collagen, type I, alpha 2 COL1A2 357.67 107.09 3.34 0.00091
32313_at tropomyosin 2 (beta) TPM2 2441.65 717.83 3.40 0.00044
32314_g_at tropomyosin 2 (beta) TPM2 1496.46 423.37 3.53 0.00022
32570_at hydroxyprostaglandin dehydrogenase 15-(NAD) HPGD 621.13 90.95 6.83 0.00594
32582_at myosin, heavy polypeptide 11, smooth muscle MYH11 2480.93 221.23 11.21 0.00010
32664_at ribonuclease, RNase A family, 4 RNASE4 1189.97 292.93 4.06 0.00000
32675_at bone marrow stromal cell antigen 1 BST1 110.17 31.52 3.50 0.00025
32755_at actin, alpha 2, smooth muscle, aorta ACTA2 8584.08 1516.43 5.66 0.00005
32775_r_at phospholipid scramblase 1 PLSCR1 721.46 184.98 3.90 0.00903
32778_at inositol 1,4,5-triphosphate receptor, type 1 ITPR1 273.38 76.98 3.55 0.00946
32786_at jun B proto-oncogene JUNB 2744.13 844.26 3.25 0.00235
32847_at myosin, light polypeptide kinase MYLK 2126.12 220.33 9.65 0.00000
33222_at frizzled homolog 7 (Drosophila) FZD7 248.43 50.92 4.88 0.00000
33243_at tumor necrosis factor, alpha-induced protein 8 TNFAIP8 551.76 167.01 3.30 0.00043
333_s_at sarcospan (Kras oncogene-associated gene) SSPN 904.43 271.55 3.33 0.00013
33303_at --- --- 315.91 97.18 3.25 0.00001
33576_at SLIT and NTRK-like family, member 5 SLITRK5 347.58 60.90 5.71 0.00004
33796_at ADP-ribosylation factor-like 4A ARL4A 486.59 121.49 4.01 0.00000
33817_at heterogeneous nuclear ribonucleoprotein A3 HNRPA3 419.19 125.02 3.35 0.00002
33878_at EF hand domain family, member D1 EFHD1 640.91 153.00 4.19 0.00005
339_at caveolin 2 CAV2 555.78 125.74 4.42 0.00618
34155_s_at tyrosinase (oculocutaneous albinism IA) TYR 2700.39 232.48 11.62 0.00001
34162_at RNA binding protein with multiple splicing RBPMS 1263.92 401.63 3.15 0.00288
34163_g_at RNA binding protein with multiple splicing RBPMS 293.28 84.49 3.47 0.00367
34181_at aspartylglucosaminidase AGA 937.54 190.19 4.93 0.00011
34202_at poliovirus receptor-related 3 PVRL3 273.28 78.96 3.46 0.00528
34280_at gamma-aminobutyric acid (GABA) A receptor, epsilon GABRE 274.98 80.11 3.43 0.00425
34297_at G protein-coupled receptor 37 (endothelin receptor type B-like) GPR37 375.80 90.79 4.14 0.00241
34335_at ephrin-B2 EFNB2 373.50 109.75 3.40 0.00042
34354_at fibroblast growth factor receptor 2 (bacteria-expressed kinase, keratinocyte growth factor receptor, craniofacial dysostosis 1, Crouzon syndrome, Pfeiffer syndrome, Jackson-Weiss syndrome) FGFR2 286.04 70.47 4.06 0.00113
34797_at phosphatidic acid phosphatase type 2A PPAP2A 816.31 176.05 4.64 0.00000
34820_at pleiotrophin (heparin binding growth factor 8, neurite growth-promoting factor 1) PTN 2036.29 576.09 3.53 0.00244
35178_at WNT inhibitory factor 1 WIF1 752.69 179.68 4.19 0.00273
35334_at glycogenin 2 GYG2 661.16 114.28 5.79 0.00074
35350_at B cell RAG associated protein GALNAC4S-6ST 1118.89 252.54 4.43 0.00000
35645_at Sorting nexin 1 SNX1 220.49 69.00 3.20 0.00034
35669_at cordon-bleu homolog (mouse) COBL 370.32 98.63 3.75 0.00020
35674_at peptidyl arginine deiminase, type II PADI2 915.60 226.46 4.04 0.00028
35724_at pirin (iron-binding nuclear protein) PIR 460.51 124.71 3.69 0.00486
35769_at G protein-coupled receptor 56 GPR56 2318.25 498.28 4.65 0.00001
35778_at kinesin family member 5C KIF5C 2079.37 216.85 9.59 0.00270
35829_at Immunoglobulin superfamily, member 4 IGSF4 1488.74 327.90 4.54 0.00001
35966_at glutaminyl-peptide cyclotransferase (glutaminyl cyclase) QPCT 632.03 152.04 4.16 0.00130
35976_at Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 CITED1 1750.02 306.12 5.72 0.00352
36059_at low density lipoprotein receptor-related protein 4 LRP4 171.64 45.85 3.74 0.00000
36070_at KIAA1199 KIAA1199 2096.19 186.82 11.22 0.00000
36133_at desmoplakin DSP 1090.85 298.18 3.66 0.00017
36308_at Zic family member 1 (odd-paired homolog, Drosophila) ZIC1 2078.46 77.89 26.68 0.00007
36681_at apolipoprotein D APOD 9115.99 2719.25 3.35 0.00183
36861_at adlican DKFZp564I1922 1905.16 287.21 6.63 0.00000
36894_at chromobox homolog 7 CBX7 1738.60 575.35 3.02 0.00006
36909_at WEE1 homolog (S. pombe) WEE1 406.19 125.48 3.24 0.00031
36925_at heat shock 70kDa protein 2 HSPA2 378.86 111.22 3.41 0.00326
37005_at neuroblastoma, suppression of tumorigenicity 1 NBL1 6550.32 1065.73 6.15 0.00000
37015_at aldehyde dehydrogenase 1 family, member A1 ALDH1A1 3078.42 475.87 6.47 0.00004
37043_at inhibitor of DNA binding 3, dominant negative helix-loop-helix protein ID3 5475.53 1157.62 4.73 0.00025
37272_at inositol 1,4,5-trisphosphate 3-kinase B ITPKB 1798.75 538.25 3.34 0.00002
37388_at tissue factor pathway inhibitor 2 TFPI2 436.43 97.36 4.48 0.00254
37407_s_at myosin, heavy polypeptide 11, smooth muscle MYH11 10744.09 1427.46 7.53 0.00002
37530_s_at reelin RELN 2082.42 99.77 20.87 0.00000
37534_at coxsackie virus and adenovirus receptor CXADR 424.44 97.19 4.37 0.00000
37701_at regulator of G-protein signalling 2, 24kDa RGS2 3148.76 703.29 4.48 0.00009
37707_i_at alcohol dehydrogenase 5 (class III), chi polypeptide ADH5 613.68 193.86 3.17 0.00000
37708_r_at alcohol dehydrogenase 5 (class III), chi polypeptide ADH5 278.89 78.59 3.55 0.00000
37908_at guanine nucleotide binding protein (G protein), gamma 11 GNG11 2451.41 790.23 3.10 0.00041
37929_at immunoglobulin superfamily, member 4 IGSF4 1281.70 419.61 3.05 0.00419
38049_g_at RNA binding protein with multiple splicing RBPMS 1137.06 266.68 4.26 0.00226
38087_s_at S100 calcium binding protein A4 (calcium protein, calvasculin, metastasin, murine placental homolog) S100A4 1990.02 643.64 3.09 0.00320
38124_at midkine (neurite growth-promoting factor 2) MDK 3668.86 617.37 5.94 0.00078
38178_at hydroxysteroid (17-beta) dehydrogenase 2 HSD17B2 2764.75 514.92 5.37 0.00027
38227_at microphthalmia-associated transcription factor MITF 159.05 43.03 3.70 0.00455
38317_at transcription elongation factor A (SII)-like 1 TCEAL1 1055.38 275.92 3.83 0.00000
38408_at transmembrane 4 superfamily member 2 TM4SF2 834.88 137.46 6.07 0.00013
38627_at Hepatic leukemia factor HLF 453.78 118.88 3.82 0.00061
38636_at immunoglobulin superfamily containing leucine-rich repeat ISLR 3079.97 735.90 4.19 0.00003
38660_at cytochrome c oxidase subunit VIa polypeptide 2 COX6A2 395.29 102.73 3.85 0.00826
38673_s_at cyclin-dependent kinase inhibitor 1C (p57, Kip2) CDKN1C 1345.80 378.42 3.56 0.00440
38700_at cysteine and glycine-rich protein 1 CSRP1 2586.15 716.63 3.61 0.00005
38717_at DKFZP586A0522 protein DKFZP586A0522 1631.17 410.93 3.97 0.00024
38927_i_at tyrosinase (oculocutaneous albinism IA) TYR 1648.02 173.73 9.49 0.00001
38928_r_at tyrosinase (oculocutaneous albinism IA) TYR 2678.86 349.45 7.67 0.00001
39063_at actin, alpha, cardiac muscle ACTC 378.97 97.19 3.90 0.00390
39066_at microfibrillar-associated protein 4 MFAP4 1125.26 221.48 5.08 0.00021
39069_at AE binding protein 1 AEBP1 1897.28 510.16 3.72 0.00040
39117_at PHD finger protein 2 PHF2 475.52 133.28 3.57 0.00000
39120_at metallothionein 1X MT1X 6879.55 2062.92 3.33 0.00353
39145_at myosin, light polypeptide 9, regulatory MYL9 6282.63 1226.49 5.12 0.00017
39266_at Clone 24405 mRNA sequence --- 339.06 109.12 3.11 0.00442
39350_at glypican 3 GPC3 1251.24 249.44 5.02 0.00044
39382_at tripartite motif-containing 2 TRIM2 1484.39 443.43 3.35 0.00009
39528_at Ras-related associated with diabetes RRAD 917.09 145.33 6.31 0.00322
39533_at solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 SLC7A6 597.64 152.65 3.92 0.00012
39550_at glycosyltransferase 25 domain containing 2 GLT25D2 661.44 191.66 3.45 0.00037
39583_at leucine rich repeat neuronal 5 LRRN5 1078.27 305.96 3.52 0.00237
39615_at KIAA1026 protein KIAA1026 1364.28 372.92 3.66 0.00361
39625_at Homo sapiens, Similar to likely ortholog of yeast ARV1, clone IMAGE:4733238, mRNA --- 355.71 67.20 5.29 0.00007
39690_at PDZ and LIM domain 3 PDLIM3 585.63 142.74 4.10 0.00026
39788_at plakophilin 4 PKP4 551.50 145.79 3.78 0.00036
39790_at ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 ATP2A2 1616.91 501.37 3.22 0.00007
40069_at supervillin SVIL 662.47 220.14 3.01 0.00042
40071_at cytochrome P450, family 1, subfamily B, polypeptide 1 CYP1B1 3787.21 937.33 4.04 0.00002
40147_at vesicle amine transport protein 1 homolog (T californica) VAT1 3233.15 1018.55 3.17 0.00080
40215_at UDP-glucose ceramide glucosyltransferase UGCG 1470.95 358.23 4.11 0.00161
40282_s_at D component of complement (adipsin) DF 3530.95 410.45 8.60 0.00001
40403_at myocilin, trabecular meshwork inducible glucocorticoid response MYOC 5911.29 676.89 8.73 0.00006
40434_at podocalyxin-like PODXL 760.99 185.10 4.11 0.00068
40438_at protein phosphatase 1, regulatory (inhibitor) subunit 12A PPP1R12A 246.12 59.38 4.14 0.00010
40508_at glutathione S-transferase A4 GSTA4 1218.76 231.30 5.27 0.00003
40541_at argininosuccinate synthetase ASS 2984.97 421.78 7.08 0.00000
40740_at paired box gene 6 (aniridia, keratitis) PAX6 4527.36 465.14 9.73 0.00001
40839_at ubiquitin-like 3 UBL3 569.25 136.91 4.16 0.00006
41014_s_at paired-like homeodomain transcription factor 2 PITX2 407.14 103.12 3.95 0.00351
41182_at dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) DCT 7336.81 968.25 7.58 0.00001
41354_at stanniocalcin 1 STC1 964.29 133.06 7.25 0.00979
41419_at GULP, engulfment adaptor PTB domain containing 1 GULP1 415.08 136.75 3.04 0.00026
41433_at vascular cell adhesion molecule 1 VCAM1 627.09 98.95 6.34 0.00003
41573_at Sp3 transcription factor SP3 675.03 217.22 3.11 0.00095
41683_i_at branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease) BCKDHB 111.97 32.94 3.40 0.00239
41755_at COBL-like 1 COBLL1 282.70 77.99 3.62 0.00078
41839_at growth arrest-specific 1 GAS1 1279.96 255.16 5.02 0.00002
496_s_at interleukin 11 receptor, alpha IL11RA 409.56 119.88 3.42 0.00038
577_at midkine (neurite growth-promoting factor 2) MDK 4676.89 1068.87 4.38 0.00052
605_at vesicle amine transport protein 1 homolog (T californica) VAT1 2115.64 630.83 3.35 0.00099
654_at MAX interactor 1 MXI1 2275.80 637.26 3.57 0.00014
656_at inositol polyphosphate-1-phosphatase INPP1 687.62 215.01 3.20 0.00000
661_at growth arrest-specific 1 GAS1 1617.16 284.04 5.69 0.00000
755_at inositol 1,4,5-triphosphate receptor, type 1 ITPR1 623.20 174.96 3.56 0.00919
767_at myosin, heavy polypeptide 11, smooth muscle MYH11 9333.43 1144.45 8.16 0.00000
859_at cytochrome P450, family 1, subfamily B, polypeptide 1 CYP1B1 2599.90 661.82 3.93 0.00005
871_s_at hepatic leukemia factor HLF 169.51 48.44 3.50 0.00205
973_at serum/glucocorticoid regulated kinase SGK 780.00 158.85 4.91 0.00051
977_s_at cadherin 1, type 1, E-cadherin (epithelial) CDH1 385.72 102.76 3.75 0.00718