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Kartik
Chandran Laboratory Earth
and Environmental Engineering |
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RESEARCH |
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Environmental Microbiology and
Biotechnology Our
group employs multidisciplinary strategies to study microbial communities in
natural and engineered systems. We are
guided by the ultimate vision that gaining a better understanding of these
communities will allow us to fully harness their power towards achieving
several objectives such as waste treatment, optimal anti-microbial therapies
and ultimately contribute to improved environmental and public health. |
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Modeling
microbial communities
Notwithstanding
the recent strides made in chemical and biological characterization
techniques, numerous steps in environmentally relevant microbial processes
such as activated sludge wastewater treatment are still modeled using
black-box descriptors. Our
group goes beyond simply developing structured mathematical models that
describe microbial communities and interactions. We develop optimal experimental designs
using which these models can be parameterized and applied meaningfully. |
Microbial
ecology of communities
Interrogating the core biocatalysts in microbial communities may
provide powerful information on community structure and function. To this
end, we apply state of the art tools to answer questions directed at these
communities such as: ·
Who is where ? (identity, abundance and spatial location) ·
What are they doing ? (function) |
Community
functions
Despite ongoing genome sequencing and discovery of many microorganisms
in unexpected environmental niches, it is clear that we know little about the
complement of microbial metabolic pathways and their interaction with
environmental factors. We
employ techniques like qPCR and custom DNA chips along with advanced
bioinformatics to resolve community structure with metabolism. |
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