Sequence Analysis Web Sites


Internet Sequence Analysis Algorithm Checklist

Here is a list of sequence analysis web sites that I have found to be useful.
The list is keyed to the lessons in my Biological Sequence Analysis Course.

Lesson 1: Sequence Analysis File Formats and Databases

Lesson 2: Sequence Comparison and Alignment

Lesson 3: Database Searching by Sequence

Lesson 4: Multiple Sequence Alignment

Lesson 5: Patterns, Profiles, and their Databases

Lesson 6: Mapping, Primer Design, and RNA Secondary Structure Prediction

Lesson 7: Genomic Analysis

Lesson 8: Protein Structure and Location

Lesson 9: Molecular Systematics

Lesson 10: Functional Genomics I: Microarray Analysis

Lesson 11: Functional Genomics II: Functional Databases and Clustering

Lesson 12: Functional Genomics III: RNASeq

Lesson 13: Classification

A 1 page guide to sequence databases

Isaac today

This site is maintained by

Richard Friedman

Last modified: February 24, 2022