Sequence Analysis Web Sites
ISAAC
Internet Sequence Analysis Algorithm Checklist
Here is a list of sequence analysis web sites that I have found to be useful.
The list is keyed to the lessons in my Biological Sequence Analysis Course.
Lesson 1: Sequence Analysis File Formats and Databases
Lesson 2: Sequence Comparison and Alignment
Lesson 3: Database Searching by Sequence
Lesson 4: Multiple Sequence Alignment
Lesson 5: Patterns, Profiles, and their Databases
Lesson 6: Mapping, Primer Design, and RNA Secondary Structure Prediction
Lesson 7: Genomic Analysis
Lesson 8: Protein Structure and Location
Lesson 9: Molecular Systematics
Lesson 10: Functional Genomics I: Microarray Analysis
Lesson 11: Functional Genomics II: Functional Databases and Clustering
Lesson 12: Functional Genomics III: RNASeq
Lesson 13: Classification
A 1 page guide to sequence databases
Isaac today
This site is maintained by
Richard Friedman
Last modified: February 24, 2022